Differences

This shows you the differences between two versions of the page.

Link to this comparison view

start [2015/06/10 23:19]
w.akhtar [trip]
start [2015/06/10 23:19] (current)
w.akhtar [trip]
Line 38: Line 38:
  
 ===== trip ===== ===== trip =====
-trip is a Perl and R based program to generate a table of barcode sequences, their counts and mapping information given fastq files for normalization,​ expression and mapping reads. The script depends on the programming language **Perl** and the Perl module **Text::​LevenshteinXS**,​ the alignment tool **Bowtie2**,​ the programming language **R** and the R packages **ggplot2** and **gridExtra**. For details see the user manual provided with the script.+**trip** is a Perl and R based program to generate a table of barcode sequences, their counts and mapping information given fastq files for normalization,​ expression and mapping reads. The script depends on the programming language **Perl** and the Perl module **Text::​LevenshteinXS**,​ the alignment tool **Bowtie2**,​ the programming language **R** and the R packages **ggplot2** and **gridExtra**. For details see the user manual provided with the script.
  
  ​{{:​trip0.5.zip|Download trip from here}}  ​{{:​trip0.5.zip|Download trip from here}}